HORDB

ID: hor003178
Uniprot ID: A0A3R7QE37
Protein name: RYamide
Gene name: NA
Organism: Penaeus vannamei (Whiteleg shrimp) (Litopenaeus vannamei)
Family: NPY family
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Penaeus (genus), Penaeidae (family), Penaeoidea (superfamily), Dendrobranchiata (suborder), Decapoda (order), Eucarida (superorder), Eumalacostraca (subclass), Malacostraca (class), Multicrustacea (superclass), Crustacea (subphylum), Pancrustacea, Mandibulata, Arthropoda (phylum), Panarthropoda, Ecdysozoa, Protostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: NA
GO CC: GO:0016020 membrane

Sequence: SGFYANRY
Length: 8
Propeptide: MSVVQPESKKQTQRSHTHRLQRPLDAPRLAFDAHSPALAPLPQPLPNVAPPKMSRFLCHMTLLLLAAVALSAAQGFYSQRYGKRGDSNREITVRSGFYANRYGRSPPHDLPEIKVRSSRFIGGSRYGKRSGPADVTPIMTSEADEAEMPATFLVGESVVCLLIDVPDIYRCIRKSVSEESTN
Signal peptide: NA
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor003178_AF2.pdb

hor003178_ESM.pdb

Mass:	110207	Formula:	C45H60N12O13
Absent amino acids:	CDEHIKLMPQTVW	Common amino acids:	Y
pI:	9.17	Basic residues:	1
Polar residues:	5	Hydrophobic residues:	2
Hydrophobicity:	-90	Boman Index:	-1951
Half-Life:	1.9 hour	Half-Life Yeast:	>20 hour
Half-Life E.Coli:	>10 hour	Aliphatic Index	12.5
Instability Index:	6967.5	Extinction Coefficient cystines:	2980
Absorbance 280nm:	425.71

PubMed ID: 19852991
Title: Combining in Silico Transcriptome Mining and Biological Mass Spectrometry for Neuropeptide Discovery in the Pacific White Shrimp Litopenaeus Vannamei